RaMP Publications

Haworth, Kevin, P. Arunkumar, Bryan Goldstein, Haili Su, Karla Mercado-Shekhar, Ellena Privitera, Rohan Srivastava, Christy Holland, and Andrew Redington. "Dissolved Oxygen Scavenging by Acoustic Droplet Vaporization Using Intravascular Ultrasound." 2017 IEEE International Ultrasonics Symposium (IUS) (2017)

Mcnally, Jonathan, Scott Millen, Vandana Chaturvedi, Nora Lakes, Catherine Terrell, Eileen Elfers, Kaitlin Carroll, Simon Hogan, Paul Andreassen, Julie Kanter, Carl Allen, Michael Henry, Jay Greenberg, Stephan Ladisch, Michelle Hermiston, Michael Joyce, David Hildeman, Jonathan Katz, and Michael Jordan. "Manipulating DNA Damage-response Signaling for the Treatment of Immune-mediated Diseases." Proceedings of the National Academy of Sciences 114.24 (2017)

O’Donovan, Sinead, Courtney Sullivan, Rachael Koene, Emily Devine, Kathryn Hasselfeld, Cassidy Moody, and Robert Mccullumsmith. "Cell-subtype-specific Changes in Adenosine Pathways in Schizophrenia." Neuropsychopharmacology 43.8 (2018): 1667-674.

Stevens, Mariana, Praneet Chaturvedi, Scott Rankin, Melissa Macdonald, Sajjeev Jagannathan, Masashi Yukawa, Artem Barski, and Aaron Zorn. "Genomic Integration of Wnt/β-catenin and BMP/Smad1 Signaling Coordinates Foregut and Hindgut Transcriptional Programs." Development 144.7 (2017): 1283- 295.

Gerhardt, Bradley, Lauren Leesman, Kaulini Burra, John Snowball, Rachel Rosenzweig, Natalie Guzman, Manoj Ambalavanan, and Debora Sinner. "Notum Attenuates Wnt/β–catenin Signaling to Promote Tracheal Cartilage Patterning." Developmental Biology 436.1 (2018): 14-27.

Nayak, Gowri, Yoshinobu Odaka, Vikram Prasad, Alyssa Solano, Eun-Jin Yeo, Shruti Vemaraju, Jeffery Molkentin, Andreas Trumpp, Bart Williams, Sujata Rao, and Richard Lang. "Developmental Vascular Regression Is Regulated by a Wnt/β-catenin, MYC and CDKN1A Pathway That Controls Cell Proliferation and Cell Death." Development 145.12 (2018)

Tiwari D, Brager DH, Rymer JK, Bunk AT, White AR, Elsayed NA, Krzeski JC, Snider A, Schroeder Carter LM, Danzer SC, Gross C. MicroRNA inhibition upregulates hippocampal A-type potassium current and reduces seizure frequency in a mouse model of epilepsy. Neurobiol Dis. 2019 Oct;130:104508. doi: 10.1016/j.nbd.2019.104508. Epub 2019 Jun 15. PubMed PMID: 31212067; PubMed Central PMCID: PMC6689429.

Gross C, Banerjee A, Tiwari D, Longo F, White AR, Allen AG, Schroeder-Carter LM, Krzeski JC, Elsayed NA, Puckett R, Klann E, Rivero RA, Gourley SL, Bassell GJ. Isoform-selective phosphoinositide 3-kinase inhibition ameliorates a broad range of fragile X syndrome-associated deficits in a mouse model. Neuropsychopharmacology. 2019 Jan;44(2):324-333. doi: 10.1038/s41386-018-0150-5. Epub 2018 Jul 13. PubMed PMID: 30061744; PubMed Central PMCID: PMC6300538.

Froehlich TE, Fogler J, Barbaresi WJ, Elsayed NA, Evans SW, Chan E. Using ADHD Medications to Treat Coexisting ADHD and Reading Disorders: A Systematic Review. Clin Pharmacol Ther. 2018 Oct;104(4):619-637. doi: 10.1002/cpt.1192. Epub 2018 Aug 30. PubMed PMID: 30053315; PubMed Central PMCID: PMC6141313.

Wink LK, Adams R, Pedapati EV, Dominick KC, Fox E, Buck C, Erickson CA. Brief Report: Metformin for Antipsychotic-Induced Weight Gain in Youth with Autism Spectrum Disorder. J Autism Dev Disord. 2017 Jul;47(7):2290-2294. Doi 10.1007/s10803-017-3132-2. PubMed PMID: 28447303.

Sinner DI, Carey B, Zgherea D, Kaufman KM, Leesman L, Wood RE, Rutter MJ, de Alarcon A, Elluru RG, Harley JB, Whitsett JA, Trapnell BC. Complete Tracheal Ring Deformity: A Translational Genomics Approach to Pathogenesis. Am J Respir Crit Care Med. 2019 Jun 19. doi: 10.1164/rccm.201809-1626OC. [Epub ahead of print] PubMed PMID: 31215789.

Call M, Elzarka M, Kunesh M, Hura N, Birk DE, Kao WW. Therapeutic efficacy of mesenchymal stem cells for the treatment of congenital and acquired corneal opacity. Mol Vis. 2019 Aug 7;25:415-426. eCollection 2019. PubMed PMID: 31523119; PubMed Central PMCID: PMC6707616.

Abbass MA, Killin JK, Mahalingam N, Hooi FM, Barthe PG, Mast TD. Real-Time Spatiotemporal Control of High-Intensity Focused Ultrasound Thermal Ablation Using Echo Decorrelation Imaging in ex Vivo Bovine Liver. Ultrasound Med Biol. 2018 Jan;44(1):199-213. doi: 10.1016/j.ultrasmedbio.2017.09.007. Epub 2017 Oct 23. PubMed PMID: 29074273; PubMed Central PMCID: PMC5712268.

Abbass MA, Garbo AJ, Mahalingam N, Killin JK, Mast TD. Optimized Echo Decorrelation Imaging Feedback for Bulk Ultrasound Ablation Control. IEEE Trans Ultrason Ferroelectr Freq Control. 2018 Oct;65(10):1743-1755. doi: 10.1109/TUFFC.2018.2847599. Epub 2018 Jun 14. PubMed PMID: 29994657; PubMed Central PMCID: PMC6294441.

Yadav N, Chandra H. Suppression of inflammatory and infection responses in lung macrophages by eucalyptus oil and its constituent 1,8-cineole: Role of pattern recognition receptors TREM-1 and NLRP3, the MAP kinase regulator MKP-1, and NFκB. PLoS One. 2017 Nov 15;12(11):e0188232. doi: 10.1371/journal.pone.0188232. eCollection 2017. PubMed PMID: 29141025; PubMed Central PMCID: PMC5687727.

Yadav N, Chandra H. Modulation of alveolar macrophage innate response in proinflammatory-, prooxidant-, and infection- models by mint extract and chemical constituents: Role of MAPKs. Immunobiology. 2018 Jan;223(1):49-56. doi: 10.1016/j.imbio.2017.10.015. Epub 2017 Oct 8. PubMed PMID: 29031422.

Saha S, Hosmani PS, Villalobos-Ayala K, Miller S, Shippy T, Flores M, Rosendale A, Cordola C, Bell T, Mann H, DeAvila G, DeAvila D, Moore Z, Buller K, Ciolkevich K, Nandyal S, Mahoney R, Voorhis JV, Dunlevy M, Farrow D, Hunter D, Morgan T, Shore K, Guzman V, Izsak A, Dixon DE, Cridge A, Cano L, Cao X, Jiang H, Leng N, Johnson S, Cantarel BL, Richards S, English A, Shatters RG, Childers C, Chen MJ, Hunter W, Cilia M, Mueller LA, Munoz-Torres M, Nelson D, Poelchau MF, Benoit JB, Wiersma-Koch H, D'Elia T, Brown SJ. Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community. Database (Oxford). 2019 Jan 1;2019. pii: baz035. doi: 10.1093/database/baz035. PubMed PMID: 30820572; PubMed Central PMCID: PMC6395793.

Saha S, Hosmani PS, Villalobos-Ayala K, Miller S, Shippy T, Flores M, Rosendale A, Cordola C, Bell T, Mann H, DeAvila G, DeAvila D, Moore Z, Buller K, Ciolkevich K, Nandyal S, Mahoney R, Van Voorhis J, Dunlevy M, Farrow D, Hunter D, Morgan T, Shore K, Guzman V, Izsak A, Dixon DE, Cridge A, Cano L, Cao X, Jiang H, Leng N, Johnson S, Cantarel BL, Richards S, English A, Shatters RG, Childers C, Chen MJ, Hunter W, Cilia M, Mueller LA, Munoz-Torres M, Nelson D, Poelchau MF, Benoit JB, Wiersma-Koch H, D'Elia T, Brown SJ. Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community. Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax032. Erratum in: Database (Oxford). 2019 Jan 1;2019:. PubMed PMID: 29220441; PubMed Central PMCID: PMC5502364.

Rosendale AJ, Dunlevy ME, McCue MD, Benoit JB. Progressive behavioural, physiological and transcriptomic shifts over the course of prolonged starvation in ticks. Mol Ecol. 2019 Jan;28(1):49-65. doi: 10.1111/mec.14949. PubMed PMID: 30449039.

Rosendale AJ, Dunlevy ME, Fieler AM, Farrow DW, Davies B, Benoit JB. Dehydration and starvation yield energetic consequences that affect survival of the American dog tick. J Insect Physiol. 2017 Aug;101:39- 46. doi: 10.1016/j.jinsphys.2017.06.012. Epub 2017 Jun 23. PubMed PMID: 28648807.

Rosendale AJ, Romick-Rosendale LE, Watanabe M, Dunlevy ME, Benoit JB. Mechanistic underpinnings of dehydration stress in the American dog tick revealed through RNA-Seq and metabolomics. J Exp Biol. 2016 Jun 15;219(Pt 12):1808-19. doi: 10.1242/jeb.137315. PubMed PMID: 27307540.

Rosendale AJ, Farrow DW, Dunlevy ME, Fieler AM, Benoit JB. Cold hardiness and influences of hibernaculum conditions on overwintering survival of American dog tick larvae. Ticks Tick Borne Dis. 2016 Oct;7(6):1155-1161. doi: 10.1016/j.ttbdis.2016.08.003. Epub 2016 Aug 10. PubMed PMID: 27546608.

Nguyen MT, Vemaraju S, Nayak G, Odaka Y, Buhr ED, Alonzo N, Tran U, Batie M, Upton BA, Darvas M, Kozmik Z, Rao S, Hegde RS, Iuvone PM, Van Gelder RN, Lang RA. An opsin 5-dopamine pathway mediates light-dependent vascular development in the eye. Nat Cell Biol. 2019 Apr;21(4):420-429. doi: 10.1038/s41556-019-0301-x. Epub 2019 Apr 1. PubMed PMID: 30936473; PubMed Central PMCID: PMC6573021.

Ross JL, Queme LF, Lamb JE, Green KJ, Jankowski MP. Sex differences in primary muscle afferent sensitization following ischemia and reperfusion injury. Biol Sex Differ. 2018 Jan 3;9(1):2. doi: 10.1186/s13293-017-0163-5. PubMed PMID: 29298725; PubMed Central PMCID: PMC5751812.

Ross JL, Queme LF, Lamb JE, Green KJ, Ford ZK, Jankowski MP. Interleukin 1β inhibition contributes to the antinociceptive effects of voluntary exercise on ischemia/reperfusion-induced hypersensitivity. Pain. 2018 Feb;159(2):380-392. doi: 10.1097/j.pain.0000000000001094. PubMed PMID: 29112534; PubMed Central PMCID: PMC5927851.

Jennings, EC, Korthauer, MW, Hamilton, TL, Benoit, JB. Matrotrophic viviparity constrains microbiome acquisition during gestation in a live-bearing cockroach, Diploptera punctata. Ecol Evol. 2019; 00: 1– 14. https://doi.org/10.1002/ece3.5580

Weese ME, Krevh RA, Li Y, Alvarez NT, Ross AE. Defect Sites Modulate Fouling Resistance on Carbon Nanotube Fiber Electrodes. ACS Sens. 2019 Apr 26;4(4):1001-1007. doi: 10.1021/acssensors.9b00161. Epub 2019 Apr 9. PubMed PMID: 30920207.

Boggero IA, Schneider VJ 2nd, Thomas PL, Nahman-Averbuch H, King CD. Associations of self-report and actigraphy sleep measures with experimental pain outcomes in patients with temporomandibular disorder and healthy controls. J Psychosom Res. 2019 Aug;123:109730. doi: 10.1016/j.jpsychores.2019.05.008. Epub 2019 May 22. PubMed PMID: 31376882.

Gruber SMS, Ghosh P, Mueller KW, Whitlock PW, Lin CY. Novel Process for 3D Printing Decellularized Matrices. J Vis Exp. 2019 Jan 7;(143). doi: 10.3791/58720. PubMed PMID: 30663704.

McAlees JW, Baker T, Kaur D, McKnight C, Lindsley A, Strait RT, Zhang X, Biagini Myers JM, Butsch Kovacic M, Lewkowich IP. Age and early maternal smoking contribute to epithelial cell IL-13 responsiveness in a pediatric asthma population. Allergy. 2019 May 18. doi: 10.1111/all.13876. [Epub ahead of print] PubMed PMID: 31102477.

Kim D, McAlees JW, Bischoff LJ, Kaur D, Houshel LK, Gray J, Hargis J, Davis X, Dudas PL, Deshmukh H, Lewkowich IP. Combined administration of anti-IL-13 and anti-IL-17A at individually sub-therapeutic doses limits asthma-like symptoms in a mouse model of Th2/Th17 high asthma. Clin Exp Allergy. 2019 Mar;49(3):317-330. doi: 10.1111/cea.13301. Epub 2018 Nov 29. PubMed PMID: 30353972; PubMed Central PMCID: PMC6393183.

Bailes AF, Strenk ML, Quatman-Yates C, Hobart J, Furnier A. Documenting Physical Therapy Dose for Individuals With Cerebral Palsy: A Quality Improvement Initiative. Pediatr Phys Ther. 2019 Jul;31(3):234- 241. doi: 10.1097/PEP.0000000000000614. PubMed PMID: 31206504.

Miller DE, Forney C, Rochman M, Cranert S, Habel J, Rymer J, Lynch A, Schroeder C, Lee J, Sauder A, Smith Q, Chawla M, Trimarchi MP, Lu X, Fjellman E, Brusilovsky M, Barski A, Waggoner S, Weirauch MT, Rothenberg ME, Kottyan LC. Genetic, Inflammatory, and Epithelial Cell Differentiation Factors Control Expression of Human Calpain-14. G3 (Bethesda). 2019 Mar 7;9(3):729-736. doi: 10.1534/g3.118.200901. PubMed PMID: 30626591; PubMed Central PMCID: PMC6404614.

Ton QV, Leino D, Mowery SA, Bredemeier NO, Lafontant PJ, Lubert A, Gurung S, Farlow JL, Foroud TM, Broderick J, Sumanas S. Collagen COL22A1 maintains vascular stability and mutations in COL22A1 are potentially associated with intracranial aneurysms. Dis Model Mech. 2018 Dec 12;11(12). pii: dmm033654. doi: 10.1242/dmm.033654. PubMed PMID: 30541770; PubMed Central PMCID: PMC6307901.

Salem ESB, Murakami K, Takahashi T, Bernhard E, Borra V, Bethi M, Nakamura T. Isolation of Primary Mouse Hepatocytes for Nascent Protein Synthesis Analysis by Non-radioactive L-azidohomoalanine Labeling Method. J Vis Exp. 2018 Oct 23;(140). doi: 10.3791/58323. PubMed PMID: 30417869; PubMed Central PMCID: PMC6235588.

Gruenstein EI, Schlemm DJ, Bethi M, Keller SJ. The early signaling pathway of live yeast cell derivative in THP-1 monocytes. Cell Calcium. 2018 Jul;73:112-120. doi: 10.1016/j.ceca.2018.04.008. Epub 2018 Apr 22. PubMed PMID: 29734114.

Aguilar JM, Elleman CB, Cassedy AE, Mercuri Minich N, Zhang N, Owen Yeates K, Taylor HG, Wade SL. Long term effects of early childhood traumatic brain injury on narrative discourse gist and psychosocial functioning. Disabil Rehabil. 2019 Apr 12:1-10. doi: 10.1080/09638288.2019.1594397. [Epub ahead of print] PubMed PMID: 30978116.

Nahman-Averbuch H, Leon E, Hunter BM, Ding L, Hershey AD, Powers SW, King CD, Coghill RC. Increased pain sensitivity but normal pain modulation in adolescents with migraine. Pain. 2019 May;160(5):1019- 1028. doi: 10.1097/j.pain.0000000000001477. PubMed PMID: 30624343.

Emmert AS, Vuong SM, Shula C, Lindquist D, Yuan W, Hu YC, Mangano FT, Goto J. Characterization of a novel rat model of X-linked hydrocephalus by CRISPR-mediated mutation in L1cam. J Neurosurg. 2019 Feb 8:1-14. doi: 10.3171/2018.10.JNS181015. [Epub ahead of print] PubMed PMID: 30738385.

Alam P, Haile B, Arif M, Pandey R, Rokvic M, Nieman M, Maliken BD, Paul A, Wang YG, Sadayappan S, Ahmed RPH, Kanisicak O. Inhibition of Senescence-Associated Genes Rb1 and Meis2 in Adult Cardiomyocytes Results in Cell Cycle Reentry and Cardiac Repair Post-Myocardial Infarction. J Am Heart Assoc. 2019 Aug 6;8(15):e012089. doi: 10.1161/JAHA.119.012089. Epub 2019 Jul 18. PubMed PMID: 31315484.